Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-4A0A075B652 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-4A0A075B652 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Asic1-205ENSMUST00000228185 1818 ntBASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-4A0A075B652 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms