Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav8-1A0A075B641 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Efs-202ENSMUST00000227037 2540 ntBASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Trav8-1A0A075B641 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Trav8-1A0A075B641 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Trav8-1A0A075B641 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav8-1A0A075B641 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms