Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Gm8318-201ENSMUST00000182954 872 ntBASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv4A0A075B5I2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv4A0A075B5I2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv4A0A075B5I2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Gm13418-201ENSMUST00000119097 944 ntBASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Gm27459-201ENSMUST00000184860 107 ntBASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Gm43347-201ENSMUST00000200226 580 ntBASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv4A0A075B5I2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms