Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClcnkaQ9WUB7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
ClcnkaQ9WUB7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 BC037039-201ENSMUST00000192003 2205 ntBASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClcnkaQ9WUB7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClcnkaQ9WUB7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms