Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Gm43767-201ENSMUST00000198933 381 ntBASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col13a1Q9R1N9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Gm8825-201ENSMUST00000182565 998 ntBASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col13a1Q9R1N9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms