Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Htra1Q9R118 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Htra1Q9R118 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Htra1Q9R118 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Htra1Q9R118 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Htra1Q9R118 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.36□□□□□ -0.11
Htra1Q9R118 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Htra1Q9R118 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Htra1Q9R118 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Htra1Q9R118 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.35□□□□□ -0.11
Htra1Q9R118 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.35□□□□□ -0.11
Htra1Q9R118 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Gm11355-201ENSMUST00000121120 306 ntBASIC14.35□□□□□ -0.11
Htra1Q9R118 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.35□□□□□ -0.11
Htra1Q9R118 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Gm10231-201ENSMUST00000181584 441 ntBASIC14.35□□□□□ -0.11
Htra1Q9R118 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Gm10175-202ENSMUST00000208752 441 ntBASIC14.35□□□□□ -0.11
Htra1Q9R118 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Htra1Q9R118 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Htra1Q9R118 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.34□□□□□ -0.11
Htra1Q9R118 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.34□□□□□ -0.11
Htra1Q9R118 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Htra1Q9R118 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.34□□□□□ -0.11
Htra1Q9R118 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Htra1Q9R118 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Htra1Q9R118 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Htra1Q9R118 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Htra1Q9R118 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Htra1Q9R118 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Gm37722-201ENSMUST00000193757 208 ntBASIC14.33□□□□□ -0.12
Htra1Q9R118 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Htra1Q9R118 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Htra1Q9R118 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Htra1Q9R118 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms