Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RpgrQ9R0X5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.73■□□□□ 0.11
RpgrQ9R0X5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RpgrQ9R0X5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RpgrQ9R0X5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Olfr129-201ENSMUST00000122318 993 ntBASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Gm18669-201ENSMUST00000216049 778 ntBASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RpgrQ9R0X5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RpgrQ9R0X5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
RpgrQ9R0X5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RpgrQ9R0X5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RpgrQ9R0X5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RpgrQ9R0X5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms