Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
AmfrQ9R049 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.3■□□□□ 0.36
AmfrQ9R049 Gm6296-201ENSMUST00000222599 943 ntBASIC17.3■□□□□ 0.36
AmfrQ9R049 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
AmfrQ9R049 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AmfrQ9R049 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AmfrQ9R049 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
AmfrQ9R049 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.29■□□□□ 0.36
AmfrQ9R049 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AmfrQ9R049 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.29■□□□□ 0.36
AmfrQ9R049 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AmfrQ9R049 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AmfrQ9R049 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AmfrQ9R049 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.28■□□□□ 0.36
AmfrQ9R049 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm28659-201ENSMUST00000188013 759 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44357-201ENSMUST00000195897 142 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm19658-201ENSMUST00000196231 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44367-201ENSMUST00000196836 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44350-201ENSMUST00000197197 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44390-201ENSMUST00000197533 144 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44313-201ENSMUST00000198018 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44486-201ENSMUST00000198508 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44314-201ENSMUST00000199263 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44394-201ENSMUST00000199558 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44484-201ENSMUST00000199873 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44466-201ENSMUST00000200264 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm44359-201ENSMUST00000200671 138 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm5864-201ENSMUST00000202263 970 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Gm9172-201ENSMUST00000212092 954 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Rps4l-201ENSMUST00000071745 943 ntBASIC17.28■□□□□ 0.36
AmfrQ9R049 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.28■□□□□ 0.36
AmfrQ9R049 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
AmfrQ9R049 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AmfrQ9R049 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.27■□□□□ 0.36
AmfrQ9R049 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Gm13884-201ENSMUST00000118103 829 ntBASIC17.27■□□□□ 0.36
AmfrQ9R049 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AmfrQ9R049 Mir8098-201ENSMUST00000184011 137 ntBASIC17.27■□□□□ 0.36
AmfrQ9R049 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms