Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps29Q9QZ88 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps29Q9QZ88 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps29Q9QZ88 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Gm12644-201ENSMUST00000119935 606 ntBASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps29Q9QZ88 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps29Q9QZ88 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms