Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.03□□□□□ -0.16
Prg4Q9JM99 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.03□□□□□ -0.16
Prg4Q9JM99 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Mir3113-201ENSMUST00000175478 76 ntBASIC14.03□□□□□ -0.16
Prg4Q9JM99 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Gm2272-201ENSMUST00000194903 582 ntBASIC14.03□□□□□ -0.16
Prg4Q9JM99 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.03□□□□□ -0.16
Prg4Q9JM99 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.03□□□□□ -0.16
Prg4Q9JM99 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prg4Q9JM99 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prg4Q9JM99 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Gm12008-201ENSMUST00000117791 755 ntBASIC14.02□□□□□ -0.17
Prg4Q9JM99 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.02□□□□□ -0.17
Prg4Q9JM99 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.02□□□□□ -0.17
Prg4Q9JM99 Gm10175-201ENSMUST00000086013 645 ntBASIC14.02□□□□□ -0.17
Prg4Q9JM99 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prg4Q9JM99 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.01□□□□□ -0.17
Prg4Q9JM99 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Gm13597-201ENSMUST00000121239 375 ntBASIC14.01□□□□□ -0.17
Prg4Q9JM99 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.01□□□□□ -0.17
Prg4Q9JM99 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.01□□□□□ -0.17
Prg4Q9JM99 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Prg4Q9JM99 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prg4Q9JM99 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Prg4Q9JM99 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Prg4Q9JM99 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prg4Q9JM99 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms