Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Gm7367-201ENSMUST00000057611 492 ntBASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn5Q9JL35 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn5Q9JL35 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Hmgn5Q9JL35 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hmgn5Q9JL35 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hmgn5Q9JL35 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn5Q9JL35 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Mir5122-201ENSMUST00000175004 89 ntBASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Mir1668-201ENSMUST00000184114 107 ntBASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgn5Q9JL35 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms