Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Gm27306-201ENSMUST00000183970 107 ntBASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn5aQ9JJV9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn5aQ9JJV9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm8410-201ENSMUST00000117225 605 ntBASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm28630-201ENSMUST00000187806 498 ntBASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn5aQ9JJV9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn5aQ9JJV9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Mir7684-201ENSMUST00000183858 60 ntBASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Gm7653-201ENSMUST00000214567 508 ntBASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn5aQ9JJV9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms