Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup50Q9JIH2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nup50Q9JIH2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nup50Q9JIH2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup50Q9JIH2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms