Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Gm2213-201ENSMUST00000197485 688 ntBASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Gm45747-201ENSMUST00000212203 999 ntBASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ube3bQ9ES34 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
Ube3bQ9ES34 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.29■□□□□ 0.52
Ube3bQ9ES34 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube3bQ9ES34 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3bQ9ES34 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.27■□□□□ 0.52
Ube3bQ9ES34 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Gm2756-201ENSMUST00000195851 400 ntBASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Thap2-203ENSMUST00000218989 527 ntBASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Gm5867-201ENSMUST00000063197 592 ntBASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3bQ9ES34 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ube3bQ9ES34 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3bQ9ES34 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3bQ9ES34 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Ube3bQ9ES34 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3bQ9ES34 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms