Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndel1Q9ERR1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Gm11355-201ENSMUST00000121120 306 ntBASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Gm9987-201ENSMUST00000069768 567 ntBASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndel1Q9ERR1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndel1Q9ERR1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ndel1Q9ERR1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ndel1Q9ERR1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ndel1Q9ERR1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndel1Q9ERR1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndel1Q9ERR1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Gm22697-201ENSMUST00000175194 63 ntBASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Gm43799-201ENSMUST00000201845 579 ntBASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Gm21559-201ENSMUST00000220638 855 ntBASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Gm8587-201ENSMUST00000076538 843 ntBASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.52□□□□□ -0.09
Ndel1Q9ERR1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ndel1Q9ERR1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms