Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Dap3Q9ER88 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dap3Q9ER88 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.23□□□□□ -0.13
Dap3Q9ER88 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.23□□□□□ -0.13
Dap3Q9ER88 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Gm27389-201ENSMUST00000183622 195 ntBASIC14.23□□□□□ -0.13
Dap3Q9ER88 Gm43799-201ENSMUST00000201845 579 ntBASIC14.23□□□□□ -0.13
Dap3Q9ER88 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.23□□□□□ -0.13
Dap3Q9ER88 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.23□□□□□ -0.13
Dap3Q9ER88 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
Dap3Q9ER88 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.22□□□□□ -0.13
Dap3Q9ER88 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.22□□□□□ -0.13
Dap3Q9ER88 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dap3Q9ER88 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms