Protein–RNA interactions for Protein: Q9EQJ0

Tpcn1, Two pore calcium channel protein 1, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpcn1Q9EQJ0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpcn1Q9EQJ0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 BC037039-201ENSMUST00000192003 2205 ntBASIC17.11■□□□□ 0.33
Tpcn1Q9EQJ0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpcn1Q9EQJ0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Gm25745-201ENSMUST00000174945 133 ntBASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpcn1Q9EQJ0 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms