Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.37■□□□□ 0.37
Upf1Q9EPU0 AA619741-201ENSMUST00000195095 646 ntBASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upf1Q9EPU0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Gm12341-201ENSMUST00000119724 503 ntBASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upf1Q9EPU0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Gm29199-201ENSMUST00000187766 775 ntBASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Upf1Q9EPU0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms