Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13cQ9D8D0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf13cQ9D8D0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.08□□□□□ -0.47
Tnfrsf13cQ9D8D0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gm16061-201ENSMUST00000122167 857 ntBASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gm7370-201ENSMUST00000219471 767 ntBASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13cQ9D8D0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf13cQ9D8D0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms