Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.29■□□□□ 0.84
U2af1Q9D883 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.29■□□□□ 0.84
U2af1Q9D883 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2af1Q9D883 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.28■□□□□ 0.84
U2af1Q9D883 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.28■□□□□ 0.84
U2af1Q9D883 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.28■□□□□ 0.84
U2af1Q9D883 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
U2af1Q9D883 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
U2af1Q9D883 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.28■□□□□ 0.84
U2af1Q9D883 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2af1Q9D883 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.27■□□□□ 0.84
U2af1Q9D883 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.27■□□□□ 0.84
U2af1Q9D883 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.27■□□□□ 0.84
U2af1Q9D883 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.27■□□□□ 0.84
U2af1Q9D883 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.27■□□□□ 0.84
U2af1Q9D883 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2af1Q9D883 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2af1Q9D883 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2af1Q9D883 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
U2af1Q9D883 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
U2af1Q9D883 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2af1Q9D883 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2af1Q9D883 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.26■□□□□ 0.83
U2af1Q9D883 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
U2af1Q9D883 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
U2af1Q9D883 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2af1Q9D883 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.25■□□□□ 0.83
U2af1Q9D883 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
U2af1Q9D883 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Gm14494-201ENSMUST00000118786 435 ntBASIC20.25■□□□□ 0.83
U2af1Q9D883 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.25■□□□□ 0.83
U2af1Q9D883 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2af1Q9D883 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms