Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps28Q9D1C8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Prob1-201ENSMUST00000097619 3021 ntBASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Gm13036-201ENSMUST00000117799 748 ntBASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps28Q9D1C8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Gm1401-201ENSMUST00000122048 772 ntBASIC15.81■□□□□ 0.12
Vps28Q9D1C8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 AW822252-206ENSMUST00000208904 237 ntBASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Vps28Q9D1C8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Gm5682-201ENSMUST00000173402 505 ntBASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps28Q9D1C8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vps28Q9D1C8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms