Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nip7Q9CXK8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nip7Q9CXK8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gm25287-201ENSMUST00000103846 110 ntBASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gm22918-201ENSMUST00000103855 110 ntBASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gm27622-201ENSMUST00000183779 60 ntBASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.16■□□□□ 0.66
Nip7Q9CXK8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nip7Q9CXK8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Gm5779-201ENSMUST00000218467 910 ntBASIC19.15■□□□□ 0.66
Nip7Q9CXK8 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.15■□□□□ 0.66
Nip7Q9CXK8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nip7Q9CXK8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nip7Q9CXK8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nip7Q9CXK8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nip7Q9CXK8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Gm6973-201ENSMUST00000117080 721 ntBASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nip7Q9CXK8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nip7Q9CXK8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Nip7Q9CXK8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nip7Q9CXK8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nip7Q9CXK8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms