Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retreg3Q9CQV4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retreg3Q9CQV4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retreg3Q9CQV4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retreg3Q9CQV4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Retreg3Q9CQV4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Gm18351-201ENSMUST00000188646 883 ntBASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retreg3Q9CQV4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Gm12439-201ENSMUST00000117162 365 ntBASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retreg3Q9CQV4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm5682-201ENSMUST00000173402 505 ntBASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm10060-201ENSMUST00000212002 111 ntBASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg3Q9CQV4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms