Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.35■□□□□ 0.05
Trim33Q99PP7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.34■□□□□ 0.05
Trim33Q99PP7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.34■□□□□ 0.05
Trim33Q99PP7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.34■□□□□ 0.05
Trim33Q99PP7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim33Q99PP7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim33Q99PP7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim33Q99PP7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim33Q99PP7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Gm8097-201ENSMUST00000117903 829 ntBASIC15.33■□□□□ 0.04
Trim33Q99PP7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim33Q99PP7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim33Q99PP7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm18622-201ENSMUST00000219361 595 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Gm8655-201ENSMUST00000221159 852 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.32■□□□□ 0.04
Trim33Q99PP7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms