Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm15823-201ENSMUST00000064305 670 ntBASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh15Q99PJ1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Gm15678-201ENSMUST00000117573 960 ntBASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh15Q99PJ1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pcdh15Q99PJ1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Gm27631-201ENSMUST00000184163 466 ntBASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh15Q99PJ1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh15Q99PJ1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh15Q99PJ1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms