Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf111Q99ML9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Rnf111Q99ML9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rnf111Q99ML9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15□□□□□ -0.01
Rnf111Q99ML9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf111Q99ML9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Mir3081-201ENSMUST00000175305 84 ntBASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf111Q99ML9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms