Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp1b1Q99LU0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp1b1Q99LU0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Gm15165-201ENSMUST00000118140 502 ntBASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Gm27357-201ENSMUST00000183754 135 ntBASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp1b1Q99LU0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms