Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cstf1Q99LC2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Gm5866-201ENSMUST00000177881 973 ntBASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Gm10253-201ENSMUST00000194270 940 ntBASIC15.4■□□□□ 0.06
Cstf1Q99LC2 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cstf1Q99LC2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cstf1Q99LC2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Gm24158-201ENSMUST00000175263 71 ntBASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Gm27437-201ENSMUST00000183429 107 ntBASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cstf1Q99LC2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Gm18246-201ENSMUST00000221023 728 ntBASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.38■□□□□ 0.05
Cstf1Q99LC2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms