Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Gm25287-201ENSMUST00000103846 110 ntBASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Gm22918-201ENSMUST00000103855 110 ntBASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Gm24158-201ENSMUST00000175263 71 ntBASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcd2Q99JR8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcd2Q99JR8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smarcd2Q99JR8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcd2Q99JR8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms