Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Gm27430-201ENSMUST00000184585 107 ntBASIC17.76■□□□□ 0.43
Rfc4Q99J62 Gm44333-201ENSMUST00000197168 107 ntBASIC17.76■□□□□ 0.43
Rfc4Q99J62 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfc4Q99J62 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.75■□□□□ 0.43
Rfc4Q99J62 Gm7774-201ENSMUST00000200064 533 ntBASIC17.75■□□□□ 0.43
Rfc4Q99J62 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfc4Q99J62 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.74■□□□□ 0.43
Rfc4Q99J62 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Gm16198-201ENSMUST00000118766 670 ntBASIC17.74■□□□□ 0.43
Rfc4Q99J62 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfc4Q99J62 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfc4Q99J62 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Gm18057-201ENSMUST00000208220 503 ntBASIC17.73■□□□□ 0.43
Rfc4Q99J62 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfc4Q99J62 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc4Q99J62 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc4Q99J62 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc4Q99J62 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc4Q99J62 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc4Q99J62 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfc4Q99J62 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms