Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Gm27494-201ENSMUST00000184735 189 ntBASIC18.2■□□□□ 0.5
Col20a1Q923P0 Gm45612-201ENSMUST00000211320 160 ntBASIC18.2■□□□□ 0.5
Col20a1Q923P0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Mir1895-201ENSMUST00000122615 79 ntBASIC18.19■□□□□ 0.5
Col20a1Q923P0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Col20a1Q923P0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col20a1Q923P0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Gm2272-201ENSMUST00000194903 582 ntBASIC18.18■□□□□ 0.5
Col20a1Q923P0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.18■□□□□ 0.5
Col20a1Q923P0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col20a1Q923P0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col20a1Q923P0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.17■□□□□ 0.5
Col20a1Q923P0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col20a1Q923P0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.16■□□□□ 0.5
Col20a1Q923P0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Gm25925-201ENSMUST00000158314 306 ntBASIC18.16■□□□□ 0.5
Col20a1Q923P0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.16■□□□□ 0.5
Col20a1Q923P0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col20a1Q923P0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.15■□□□□ 0.5
Col20a1Q923P0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.15■□□□□ 0.5
Col20a1Q923P0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col20a1Q923P0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms