Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sf3b3Q921M3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Gm18737-201ENSMUST00000173594 937 ntBASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Gm27622-201ENSMUST00000183779 60 ntBASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sf3b3Q921M3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3b3Q921M3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Gm11543-201ENSMUST00000120758 370 ntBASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Sf3b3Q921M3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3b3Q921M3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3b3Q921M3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms