Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha3Q91Y16 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Gm18733-201ENSMUST00000173950 856 ntBASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Gm10060-201ENSMUST00000212002 111 ntBASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha3Q91Y16 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Gm11780-201ENSMUST00000136880 516 ntBASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Gm7230-201ENSMUST00000173026 815 ntBASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha3Q91Y16 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Gm6089-201ENSMUST00000197666 938 ntBASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha3Q91Y16 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms