Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha8Q91Y12 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Sybu-209ENSMUST00000228639 4113 ntBASIC15.07■□□□□ 0
Pcdha8Q91Y12 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Gm12644-201ENSMUST00000119935 606 ntBASIC15.07■□□□□ 0
Pcdha8Q91Y12 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.07■□□□□ 0
Pcdha8Q91Y12 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdha8Q91Y12 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.06■□□□□ 0
Pcdha8Q91Y12 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha8Q91Y12 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Pcdha8Q91Y12 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha8Q91Y12 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Pcdha8Q91Y12 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha8Q91Y12 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha8Q91Y12 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Gm4459-201ENSMUST00000118750 468 ntBASIC15.05■□□□□ -0
Pcdha8Q91Y12 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Gm28033-201ENSMUST00000184224 96 ntBASIC15.05■□□□□ -0
Pcdha8Q91Y12 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.05■□□□□ -0
Pcdha8Q91Y12 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdha8Q91Y12 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdha8Q91Y12 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms