Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.15■□□□□ 0.18
Pcdhb18Q91Y02 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb18Q91Y02 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb18Q91Y02 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb18Q91Y02 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Gm14701-201ENSMUST00000117156 348 ntBASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb18Q91Y02 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Grk6-207ENSMUST00000225925 2769 ntBASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Gm15920-201ENSMUST00000118998 402 ntBASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb18Q91Y02 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms