Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm43514-201ENSMUST00000198852 424 ntBASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm8190-201ENSMUST00000199603 586 ntBASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Gm19189-201ENSMUST00000221689 754 ntBASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb20Q91XZ9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gm16420-201ENSMUST00000120258 856 ntBASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gm8581-201ENSMUST00000188636 890 ntBASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gm38247-201ENSMUST00000194675 433 ntBASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15□□□□□ -0.01
Pcdhb20Q91XZ9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Gm43906-201ENSMUST00000203194 906 ntBASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 AC154848.1-201ENSMUST00000225451 846 ntBASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb20Q91XZ9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb20Q91XZ9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms