Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb3Q91XZ7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Gm10819-201ENSMUST00000099988 561 ntBASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb3Q91XZ7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Gm9013-201ENSMUST00000132939 882 ntBASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb3Q91XZ7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms