Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb8Q91XZ2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb8Q91XZ2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Gm18622-201ENSMUST00000219361 595 ntBASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb8Q91XZ2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Gm18669-201ENSMUST00000216049 778 ntBASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb8Q91XZ2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb8Q91XZ2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb8Q91XZ2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb8Q91XZ2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb8Q91XZ2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb8Q91XZ2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhb8Q91XZ2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb8Q91XZ2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb8Q91XZ2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb8Q91XZ2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb8Q91XZ2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb8Q91XZ2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms