Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4aQ8VEJ9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4aQ8VEJ9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.02■□□□□ -0
Vps4aQ8VEJ9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4aQ8VEJ9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.02■□□□□ -0
Vps4aQ8VEJ9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.02■□□□□ -0
Vps4aQ8VEJ9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.02■□□□□ -0
Vps4aQ8VEJ9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4aQ8VEJ9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.02□□□□□ -0.01
Vps4aQ8VEJ9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4aQ8VEJ9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Gm15372-201ENSMUST00000120729 834 ntBASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Gm8000-201ENSMUST00000188378 592 ntBASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4aQ8VEJ9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4aQ8VEJ9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms