Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Gm13474-201ENSMUST00000122466 815 ntBASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpa1Q8VEE4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpa1Q8VEE4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.58■□□□□ 0.09
Rpa1Q8VEE4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpa1Q8VEE4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Rpa1Q8VEE4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpa1Q8VEE4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rpa1Q8VEE4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpa1Q8VEE4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms