Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.14■□□□□ 0.01
Q8VDP2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.14■□□□□ 0.01
Q8VDP2 Gm13168-201ENSMUST00000121771 632 ntBASIC15.14■□□□□ 0.01
Q8VDP2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.14■□□□□ 0.01
Q8VDP2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Q8VDP2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.14■□□□□ 0.01
Q8VDP2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Q8VDP2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Q8VDP2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Q8VDP2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q8VDP2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Q8VDP2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Q8VDP2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Q8VDP2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Q8VDP2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.13■□□□□ 0.01
Q8VDP2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.13■□□□□ 0.01
Q8VDP2 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.13■□□□□ 0.01
Q8VDP2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q8VDP2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q8VDP2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.12■□□□□ 0.01
Q8VDP2 Trmt13-210ENSMUST00000198454 880 ntBASIC15.12■□□□□ 0.01
Q8VDP2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.12■□□□□ 0.01
Q8VDP2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q8VDP2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Q8VDP2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Q8VDP2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q8VDP2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Q8VDP2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.11■□□□□ 0.01
Q8VDP2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Q8VDP2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Q8VDP2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Q8VDP2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Q8VDP2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q8VDP2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Q8VDP2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.1■□□□□ 0.01
Q8VDP2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.1■□□□□ 0.01
Q8VDP2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q8VDP2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms