Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sft2d2Q8VD57 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Gm18421-201ENSMUST00000204122 625 ntBASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d2Q8VD57 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Gm12085-201ENSMUST00000119263 940 ntBASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Gm38027-201ENSMUST00000192315 235 ntBASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d2Q8VD57 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms