Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.6□□□□□ -0.07
Ndc1Q8VCB1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ndc1Q8VCB1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ndc1Q8VCB1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ndc1Q8VCB1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ndc1Q8VCB1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Ndc1Q8VCB1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ndc1Q8VCB1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Gm2213-201ENSMUST00000197485 688 ntBASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ndc1Q8VCB1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Gm11764-201ENSMUST00000120221 623 ntBASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Gm9727-201ENSMUST00000161387 555 ntBASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ndc1Q8VCB1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms