Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna3Q8R4G9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Gm27525-201ENSMUST00000184465 107 ntBASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna3Q8R4G9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Gm45167-201ENSMUST00000208007 322 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms