Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Gm11539-201ENSMUST00000119837 557 ntBASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Pdlim2Q8R1G6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Gm18666-201ENSMUST00000190039 958 ntBASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim2Q8R1G6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim2Q8R1G6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdlim2Q8R1G6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pdlim2Q8R1G6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms