Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a1Q8K4Z5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sf3a1Q8K4Z5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sf3a1Q8K4Z5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sf3a1Q8K4Z5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a1Q8K4Z5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 AV026068-213ENSMUST00000223675 1171 ntBASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a1Q8K4Z5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Gm2651-201ENSMUST00000203560 838 ntBASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a1Q8K4Z5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a1Q8K4Z5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms