Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ebf4Q8K4J2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf4Q8K4J2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Gm15378-201ENSMUST00000121894 207 ntBASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf4Q8K4J2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Gm10653-202ENSMUST00000139570 835 ntBASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Gm37856-201ENSMUST00000191634 999 ntBASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Trmt13-210ENSMUST00000198454 880 ntBASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf4Q8K4J2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms