Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Mir8098-201ENSMUST00000184011 137 ntBASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rfwd3Q8CIK8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Gm28659-201ENSMUST00000188013 759 ntBASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfwd3Q8CIK8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm11780-201ENSMUST00000136880 516 ntBASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm5864-201ENSMUST00000202263 970 ntBASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm6376-201ENSMUST00000209407 580 ntBASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfwd3Q8CIK8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms