Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Gm6736-201ENSMUST00000166583 948 ntBASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Gm19164-201ENSMUST00000210667 640 ntBASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rbm28Q8CGC6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rbm28Q8CGC6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Gm10175-201ENSMUST00000086013 645 ntBASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rbm28Q8CGC6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm25925-201ENSMUST00000158314 306 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm24513-201ENSMUST00000174964 138 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm4899-201ENSMUST00000178708 719 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Mir8117-201ENSMUST00000184773 107 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm27397-201ENSMUST00000184997 107 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm43575-201ENSMUST00000196420 516 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms