Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.02■□□□□ 0.64
Smc4Q8CG47 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Smc4Q8CG47 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.02■□□□□ 0.64
Smc4Q8CG47 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc4Q8CG47 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.02■□□□□ 0.63
Smc4Q8CG47 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc4Q8CG47 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc4Q8CG47 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc4Q8CG47 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc4Q8CG47 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.01■□□□□ 0.63
Smc4Q8CG47 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Gm18246-201ENSMUST00000221023 728 ntBASIC19.01■□□□□ 0.63
Smc4Q8CG47 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc4Q8CG47 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc4Q8CG47 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19■□□□□ 0.63
Smc4Q8CG47 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Gm4913-201ENSMUST00000117075 1290 ntBASIC19■□□□□ 0.63
Smc4Q8CG47 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19■□□□□ 0.63
Smc4Q8CG47 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc4Q8CG47 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smc4Q8CG47 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc4Q8CG47 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19■□□□□ 0.63
Smc4Q8CG47 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.99■□□□□ 0.63
Smc4Q8CG47 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.99■□□□□ 0.63
Smc4Q8CG47 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.99■□□□□ 0.63
Smc4Q8CG47 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.99■□□□□ 0.63
Smc4Q8CG47 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc4Q8CG47 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.99■□□□□ 0.63
Smc4Q8CG47 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.99■□□□□ 0.63
Smc4Q8CG47 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc4Q8CG47 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms